BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H07SP1|AL430457
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1682 0.0
>3x_Contig1329
Length = 7405
Score = 1682 bits (839), Expect = 0.0
Identities = 901/936 (96%)
Strand = Plus / Minus
Query: 1 acattcaatatcagacggttaaagtttgtcgtcactaaaagattaagacatatgcatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5177 acattcaatatcagacggttaaagtttgtcgtcactaaaagattaagacatatgcttgtc 5118
Query: 61 aatwtttaaaaactttttcatcacgagtacatgactgtatgacctcttctcctttggaat 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 aatttttaaaaactttttcatcacgagtacatgactgtatgacctcttctcctttggaat 5058
Query: 121 gaactcattcctatgcwtttcaatcgtgaatagttcagagtcwaggtcwaaaccttgtgt 180
|||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 5057 gaactcattcctatgcttttcaatcgtgaattgttcagagtctaggtctaaaccttgtgt 4998
Query: 181 gtactwccggaggatgaactgagtaawagtgcttgcatctttaaatwtttttgaaaattg 240
|| || |||||||||||||||||| | ||||||||||||||||||| |||||||||||||
Sbjct: 4997 gttcttccggaggatgaactgagttatagtgcttgcatctttaaatttttttgaaaattg 4938
Query: 241 aatcgaatacaagaatcaagagtcagaaatgcatgaatggwattaaaadagtagtgtctt 300
|||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||
Sbjct: 4937 aatcgaatacaagaatcaagagtcagaaatgcatgaatggtattaaaatagttgtgtctt 4878
Query: 301 caactgaatagwcagactcgtcatctataaaagctcatcattcgacgcagaawattcgaa 360
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4877 caactgaatagtcagactcgtcatctataaaagctcatcattcgacgcagaatattcgaa 4818
Query: 361 acattctccaaaaaaaaggtgctattaaaagtgaaaacgaaagaaatgattctgagggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 acattctccaaaaaaaaggtgctattaaaagtgaaaacgaaagaaatgattctgagggac 4758
Query: 421 tacagagacattagtaaacaaatggacaactaawaggtctaggaaaggacctatttgawc 480
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 4757 tacagagacattagtaaacaaatggacaactaataggtctaggaaaggacctatttgatc 4698
Query: 481 agtcacggcaggtttctgaggcctaccataaaaagcggtgtcactcatattttttaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 agtcacggcaggtttctgaggcctaccataaaaagcggtgtcactcatattttttaaata 4638
Query: 541 tttcagtgcccagtgctatgactcctcatttcaaawagtaatgaaaacactctgtattct 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4637 tttcagtgcccagtgctatgactcctcatttcaaatagtaatgaaaacactctgtattct 4578
Query: 601 ctttgaatcattttcaagaacgtctgtgcttgggtatcggcanaaacangccaaggnnnc 660
||||||||||||||||||||||||||| |||||||||||||| | || ||||||| |
Sbjct: 4577 ctttgaatcattttcaagaacgtctgttcttgggtatcggcatattcatgccaaggtttc 4518
Query: 661 ncgnnnagcnngtaataatkctkttgataaagtgaataaatagttagtagagtctggagt 720
|| ||| |||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 4517 tcgtttagcttgtaataattcttttgataaagtgaataaatagttagtagagtctggagt 4458
Query: 721 gaagttgatctccagggaaaatgaaaaaagaattcactatatcaatcgattaatcagtct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 gaagttgatctccagggaaaatgaaaaaagaattcactatatcaatcgattaatcagtct 4398
Query: 781 tattgccaaaaacttatcaacacgtagtctttcagccagtaattccagcttttgtttttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 tattgccaaaaacttatcaacacgtagtctttcagccagtaattccagcttttgtttttg 4338
Query: 841 taaggatcatcatagtaaatcgattgatatgtgtgtatctatgaagaggtaacagataaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 taaggatcatcatagtaaatcgattgatatgtgtgtatctatgaagaggtaacagataaa 4278
Query: 901 ggaaaattccttcatctatccaccttttgatggctg 936
||||||||||||||||||||||||||||||||||||
Sbjct: 4277 ggaaaattccttcatctatccaccttttgatggctg 4242
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6848
Number of Sequences: 1807
Number of extensions: 6848
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.7 bits)